| | Pete Rock | Tha Game (feat. Raekwon, Prodigy & Ghostface Killah) | |
| | Santana Fox | Moment of Silence (feat. Prodigy) | |
| | Kool G Rap & Prodigy | Where You At | |
| | Prodigy | Keep It Thoro | |
| | Prodigy | Keep It Thoro | |
| | Prodigy & Nas | Self Conscience | |
| | Prodigy | The Life | |
| | Big Punisher | Tres Leches (Triboro Trilogy) [feat. Prodigy & Inspectah Deck] | |
| | Prodigy | Diamond (feat. Bars & Hooks) | |
| | Prodigy | The Life | |
| | Prodigy | Stuck On You | |
| | Prodigy | H.N.I.C | |
| | Prodigy | Genesis | |
| | Prodigy | Return of the Mac (aka New York S***) | |
| | Jim Jones | Take a Bow (feat. Lloyd Banks, Prodigy & Sen City) | |
| | Prodigy, Big Twins & Un Pacino | Stop Stressin | |
| | Troy Ave | New York City (feat. Raekwon, N.O.R.E. & Prodigy) | |
| | Prodigy, Un Pacino & Big Twins | In The Smash (Feat. Big Twins) | |
| | Prodigy, Un Pacino & Big Twins | Box Cutters (Feat. Big Twins) | |
| | Prodigy | You Can Never Feel My Pain | |
| | Prodigy | Trials of Love (feat. B.K. A.k.A. Mz. Bars) | |
| | Prodigy | Bang On 'Em | |
| | Prodigy | Mac 10 Handle | |
| | Prodigy | Stuck On You | |
| | Cam'ron featuring Prodigy | Losin' Weight (feat. Prodigy) | |
| | Ghostface Killah, Prodigy & Raekwon | The Game Of Rock | |
| | Prodigy, Un Pacino & Big Twins | Am I Crazy? | |
| | The Alchemist | Key to the City (feat. Nina Sky, Prodigy) | |
| | Prodigy | Wanna Be Thugs (feat. Havoc) | |
| | Prodigy | Can't Complain (feat. Twin Gambino & Chinky) | |
| | Prodigy | What U Rep (feat. Nore) | |
| | Prodigy | Rock Dat S**t | |
| | Prodigy featuring Tony Yayo & 40 Glocc | Murda Murda | |
| | Prodigy | Stop Fronting | |
| | Prodigy | Walk Out (feat. DJ Premier) | |
| | Planet Asia & Prodigy | Stick & Move | |
| | Troy Ave | New York City (feat. Raekwon, N.O.R.E. & Prodigy) | |
| | Havoc | Life We Chose (feat. Prodigy) | |
| | Prodigy, Un Pacino & Big Twins | They Want Me Dead | |
| | Prodigy, Big Twins & Un Pacino | P Keep Spittin’ | |
| | Prodigy & Big Twins | Champions | |
| | Prodigy | Three (feat. Cormega) | |
| | Prodigy | Infamous Minded (feat. Big Noyd) | |
| | Prodigy | ABC | |
| | Jadakiss featuring Prodigy | Right Where Stand (GL Mix) [Featuring Prodigy] | |
| | Prodigy | The Rotten Apple | |
| | Prodigy | Power Rap (Freestyle Interlude) | |
| | Prodigy | You Will See (feat. Berto Rich) | |
| | Curtis "50 Cent" Jackson | I Don't Know, Officer (feat. Lloyd Banks, Prodigy, Spider Loc & Ma$e) | |
| | Big Twins & Twiz The Beat Pro | The Rotten Apple (feat. Prodigy) | |
